50 lines
3.0 KiB
C++
50 lines
3.0 KiB
C++
#include "startTransmissionReconstruction.h"
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#include "Function2D.h"
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#include "MatlabWriter.h"
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#include "detection/getTransmissionData.h"
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#include "log/log.h"
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#include "config/config.h"
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#include "common/getMeasurementMetaData.h"
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#include "common/qualityReview.h"
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#include "common/dataBlockCreation/removeDataFromArrays.h"
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#include "transmissionReconstruction/dataFilter/dataFilter.h"
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#include "transmissionReconstruction/dataPreperation.h"
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#include "transmissionReconstruction/reconstruction/reconstruction.h"
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using namespace Aurora;
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using namespace Recon;
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TransmissionReconstructionResult Recon::startTransmissionReconstruction(const Aurora::Matrix& aMotorPos, const Aurora::Matrix& aMotoPosRef, const Aurora::Matrix& aSlList,
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const Aurora::Matrix& aSnList, const Aurora::Matrix& aRlList, const Aurora::Matrix& aRnList,
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const TempInfo& aTemp, const TempInfo& aTempRef, Recon::GeometryInfo& aGeom,
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GeometryInfo& aGeomRef, const MeasurementInfo& aExpInfo, const MeasurementInfo& aExpInfoRef,
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const PreComputes& aPreComputes, Parser* aParser, Parser* aParserRef)
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{
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RECON_INFO("Start getTransmissionData.");
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auto transmissionData = getTransmissionData(aMotorPos, aMotoPosRef, aSlList, aSnList, aRlList, aRnList, aTemp, aTempRef,
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aGeom, aGeomRef, aExpInfo, aExpInfoRef, aPreComputes, aParser, aParserRef);
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Matrix dists = Recon::distanceBetweenTwoPoints(transmissionData.senderList, transmissionData.receiverList);
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Matrix sosRef = Recon::temperatureToSoundSpeed(transmissionData.waterTempList, "marczak");
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Matrix valid = Recon::checkTofDetections(transmissionData.tofDataTotal, dists, sosRef,
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Recon::transParams::minSpeedOfSound,Recon::transParams::maxSpeedOfSound).valid;
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if(transParams::qualityCheck)
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{
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qualityReview(sum(valid,Aurora::All)[0], transmissionData.dataInfo.numPossibleScans);
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}
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DiscretizePositionValues positionValues = Recon::discretizePositions(transmissionData.senderList, transmissionData.receiverList, Recon::transParams::numPixelXY);
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Matrix tofData = removeDataFromArrays(transmissionData.tofDataTotal, valid);
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Matrix attData = removeDataFromArrays(transmissionData.attDataTotal, valid);
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Matrix senderList = removeDataFromArrays(positionValues.senderCoordList, valid);
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Matrix reveiverList = removeDataFromArrays(positionValues.receiverCoordList, valid);
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RECON_INFO("Start reconstructArt.");
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auto transmissionReon = reconstructArt(tofData, attData, positionValues.dims, senderList, reveiverList, positionValues.res, aTemp.expectedSOSWater[0]);
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TransmissionReconstructionResult result;
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result.recoATT = transmissionReon.outATT;
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result.recoSOS = transmissionReon.outSOS;
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result.ddmis = positionValues.ddims;
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return result;
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}
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