81 lines
2.4 KiB
C++
81 lines
2.4 KiB
C++
#include "Parser.h"
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#include "Parser.h"
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#include "config/config.h"
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#include "log/notify.h"
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#include "log/notify.h"
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#include <cstdio>
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#include <vector>
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#include "MatlabReader.h"
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#define EIGEN_USE_MKL_ALL
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#include "src/common/fileHelper.h"
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#include "startReconstructions.h"
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#include "transmissionReconstruction/detection/detection.h"
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#include "transmissionReconstruction/detection/detection.cuh"
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#include "startReconstructions.h"
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#include "log/log.h"
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/* 0 is data path.
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1 is dataRef path.
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2 is output path.
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3 is config file path.
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*/
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int main(int argc, char *argv[])
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{
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int argNum = 5;
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std::vector<std::string> args(argNum);
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args[0] = "/home/AScans_Data/CAS0.1Phantom/20230823T165617/";
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args[1] = "/home/AScans_Data/CAS0.1Phantom/20230823T171851/";
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args[2] = "/home/krad/Storage/DICOM/00e04b741e9f_20240619T145752/";
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args[3] = Recon::DEFAULT_CONFIG_PATH;
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argc = argc <= argNum? argc-1 : argNum;
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for (int i = 0; i < argc; i++)
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{
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args[i] = argv[i+1];
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}
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std::string outPutPath = args[2];
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std::string directoryPath = outPutPath;
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auto defaultLogger = getLogger("Main",outPutPath.data());
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spdlog::set_default_logger(defaultLogger);
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RECON_INFO("Read UR Args =====================");
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if(args[0].empty())
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{
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RECON_INFO("No reconstruction data.");
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return -2;
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}
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std::string configPath = Recon::fixPathSlash(args[3]);
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Recon::initalizeConfig(configPath);
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if( args[1].empty() && Recon::transParams::runTransmissionReco)
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{
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RECON_INFO("Running transmission reconstruction, but no refrence data.");
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return -3;
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}
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RECON_INFO("configPath:{0}",configPath);
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outPutPath = Recon::fixPathSlash(outPutPath);
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if(!Recon::isDirectory(directoryPath))
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{
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RECON_INFO("Output directory is not valid.");
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return -4;
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}
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RECON_INFO("outPutPath:{0}",outPutPath);
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std::string dataPath = Recon::fixPathSlash(args[0]);
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RECON_INFO("dataPath:{0}",dataPath);
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std::string dataRefPath = Recon::fixPathSlash(args[1]);
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RECON_INFO("dataRefPath:{0}",dataRefPath);
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RECON_INFO("UR Args End=======================");
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RECON_INFO("UR Start");
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int exitcode = Recon::startReconstructions(dataPath, dataRefPath, outPutPath);
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if (exitcode == 0)
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{
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RECON_INFO("UR Finish");
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return exitcode;
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}
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else{
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return exitcode;
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}
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}
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