UR/src/transmissionReconstruction/reconstruction/reconstruction.h

#ifndef _TRANS_RECONSTRUCTION_H__
#define _TRANS_RECONSTRUCTION_H__
#include "Matrix.h"
namespace Recon {
struct DiscretizePositionValues{
    Aurora::Matrix senderCoordList;
    Aurora::Matrix receiverCoordList;
    Aurora::Matrix ddims;
    Aurora::Matrix dims;
    Aurora::Matrix res;
};
struct ArtResult{
    Aurora::Matrix outSOS;
    Aurora::Matrix outATT;
    bool bentReco;
    Aurora::Matrix allHitMaps;
};
Aurora::Matrix calculateMinimalMaximalTransducerPositions(
   const Aurora::Matrix &aMSenderList, const Aurora::Matrix &aMReceiverList);

Aurora::Matrix calculateResolution(const Aurora::Matrix &aVDdims, const Aurora::Matrix &aVDims);

Aurora::Matrix getDimensions(double aNumPixelXY, const Aurora::Matrix& ddims);

Aurora::Matrix slownessToSOS(Aurora::Matrix & aVF1, double aSOS_IN_WATER);

DiscretizePositionValues discretizePositions(Aurora::Matrix &aVSenderCoordList, Aurora::Matrix &aVReceiverCoordList, double aNumPixelXY);

ArtResult reconstructArt(Aurora::Matrix &data, Aurora::Matrix &dataAtt,
                         Aurora::Matrix &dims, 
                         Aurora::Matrix &senderList,
                         Aurora::Matrix &receiverList, Aurora::Matrix &res,
                         double SOS_IN_WATER);

//TODO: exitBent, reconstructArt, saveTransmissionReconstruction.m

}
#endif // __RECONSTRUCTION_H__